Survival-associated meQTLs across different cancer types
We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs61845279 | chr10:43478876 | T/C | 4.52E-5 | 289 | 25.7 | 25.5 | 11.43 | KM Plot |
| KIRP | rs61845280 | chr10:43479142 | T/C | 5.35E-5 | 289 | 25.63 | 25.7 | 11.43 | KM Plot |
| KIRP | rs61845281 | chr10:43480498 | C/A | 4.52E-5 | 288 | 25.7 | 25.95 | 11.43 | KM Plot |
| KIRP | rs61845282 | chr10:43481076 | G/A | 4.51E-5 | 287 | 25.7 | 26.4 | 11.43 | KM Plot |
| KIRP | rs61845306 | chr10:43481155 | G/A | 4.51E-5 | 287 | 25.7 | 26.4 | 11.43 | KM Plot |
| KIRP | rs61845307 | chr10:43481745 | G/A | 4.51E-5 | 287 | 25.7 | 26.4 | 11.43 | KM Plot |
| KIRP | rs61845308 | chr10:43482407 | A/G | 5.4E-5 | 287 | 25.63 | 26.4 | 11.43 | KM Plot |
| KIRP | rs61845309 | chr10:43484745 | C/T | 4.51E-5 | 287 | 25.7 | 26.4 | 11.43 | KM Plot |
| KIRP | rs61845310 | chr10:43484930 | C/A | 4.51E-5 | 287 | 25.7 | 26.4 | 11.43 | KM Plot |
| KIRP | rs61845311 | chr10:43489026 | A/T | 5.68E-6 | 287 | 25.67 | 26.63 | 16.12 | KM Plot |
| KIRP | rs61845312 | chr10:43489320 | T/C | 4.51E-5 | 288 | 25.7 | 25.95 | 11.43 | KM Plot |
| KIRP | rs61845314 | chr10:43492207 | C/T | 4.51E-5 | 288 | 25.7 | 25.95 | 11.43 | KM Plot |
| KIRP | rs61845315 | chr10:43492209 | C/T | 5.68E-6 | 287 | 25.67 | 26.63 | 16.12 | KM Plot |
| KIRP | rs61845316 | chr10:43493188 | A/G | 5.68E-6 | 287 | 25.67 | 26.63 | 16.12 | KM Plot |
| KIRP | rs61845317 | chr10:43493456 | C/T | 5.68E-6 | 287 | 25.67 | 26.63 | 16.12 | KM Plot |